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Schizosaccharomyces pombe GeneDB

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This database contains all S. pombe (fission yeast) known and predicted protein coding genes, pseudogenes, transposons, tRNAs, rRNAs, snRNAs, snoRNAs and other known and predicted non-coding RNAs. Curation of new and existing literature is ongoing and changes are incorporated weekly. User feedback is welcome. Please send updates, comments and corrections to help us improve the resource using the feedback forms on each gene page.

 

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Information   Genome News
S. pombe Project Page   Download sequence annotation, manuals, reports and abstract books and access genome statistics, sequencing status and links to related sites.   December 2008
S. pombe GeneDB now includes "deep links" to the Biological General Repository for Interaction Datasets (BioGRID) interaction datasets from the 'Database Cross References' section of the individual Gene Pages. For further information see the pombelist archive
September 2008
GeneDB is now using Version 23 of the Pfam protein family database. A total of 4154 (83%) S. pombe proteins now have at least one Pfam domain or family assignment (compared to 76% for S. cerevisiae), the highest percentage coverage for any eukaryote.
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Example Genes  
Shortcuts to frequently requested gene lists  
Characterised genes tea1 mis6 dad1 sid2  
Inferred function taf9 trm12 cct8 gpi10  
Conserved hypothetical SPCC830.08c SPCC4B3.13  
Sequence orphans SPCC594.07c SPCC70.10  
   

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