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GeneDB omniBLAST Server

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OmniBLAST will perform a BLAST search on a set of protein databases (BLASTP or BLASTX, depending on the query sequence) or nucleotide databases (BLASTN and TBLASTX or TBLASTN) available in GeneDB and return a list of the best five HSP for each database. If there are any HSP you can click on Full Search to see the complete BLAST output.

To search individual databases with different parameters   single organism BLAST:  

To retrieve the results of a previous search, please go to the bottom of the page

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QUERY DATA

Paste your sequence here.
fasta format or just plain text will do

 
Determine sequence type automatically or set sequence type to DNA     protein   
No databases are initially selected below. The search won't work unless at least one database is chosen from below
    

Note: OmniBLAST searches may take several minutes depending on the number of selected databases. Please check the databases chosen below are correct
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DATABASE OPTIONS
Search only the BLAST databases selected below  
Jump down page to: Fungi    Protozoa    Bacteria    Parasite Vectors    Viruses    Parasitic Helminths
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A. fumigatus 
    A. fumigatus finished BAC sequences N     A. fumigatus BAC predicted proteins P
    A. fumigatus BAC predicted genes (coding sequences) N     A. fumigatus BAC ends N
    A. fumigatus whole genome shotgun reads N
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C. dubliniensis 
    C. dubliniensis contigs N     C. dubliniensis predicted genes (coding sequences) N
    C. dubliniensis predicted proteins P
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S. cerevisiae 
    S. cerevisiae genome N     S. cerevisiae predicted proteins P
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S. pombe 
    S. pombe chromosomes and mitochondrial genome (4 sequences) N     S. pombe proteins P
    S. pombe clones 504 sequences N     S. pombe predicted genes (coding sequences) N
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D. discoideum (More information on databases) 
    D. discoideum contigs N     D. discoideum predicted proteins P
    D. discoideum predicted genes (spliced DNA) N
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E. histolytica 
    E. histolytica predicted genes (coding sequences) N     E. histolytica predicted proteins P
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E. tenella 
    E. tenella predicted genes (coding sequences) N     E. tenella predicted proteins P
    E. tenella contigs Oct 2005 N     E. tenella contigs version 1 (GeneDB) N
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L. braziliensis 
    L. brasiliensis unassembled shotgun reads N     L. brasiliensis chromosome contigs N
    L. brasiliensis predicted genes (coding sequences) N     L. brasiliensis predicted proteins P
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L. infantum 
    L. infantum predicted genes (coding sequences) N     L. infantum predicted proteins P
    L. infantum unassembled shotgun reads N     L. infantum contigs N
    L. infantum additional unmapped contigs N
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L. major 
    L. major predicted genes (coding sequences) N     L. major predicted proteins P
    L. major contigs N     L. major EMBL data N
    L. major UniProt data P     All Leishmania species EMBL data N
    All Leishmania species UniProt data P     L. major chromosome shotguns N
    L. major ESTs N     L. major unassembled shotgun reads (Sanger) N
    C. deanei fosmid end reads N     L. mexicana unassembled shotgun reads N
    L. mexicana assembled contigs N
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N. caninum 
    N. caninum predicted genes (coding sequences) N     N. caninum predicted proteins P
    N. caninum chromosome contigs N
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P. berghei 
    P. berghei predicted genes (coding sequence) N     P. berghei proteins P
    P. berghei contigs, latest assembly (8X coverage) N     P. berghei reads N
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P. chabaudi 
    P. chabaudi predicted genes (coding sequence) N     P. chabaudi proteins P
    P. chabaudi contigs, latest assembly (8X coverage) N     P. chabaudi reads N
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P. falciparum 
    P. falciparum selected chromosome sequences N     P. falciparum proteins P
    P. falciparum predicted genes (coding sequences) N     P. falciparum Sanger Reads N
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P. knowlesi 
    P. knowlesi predicted genes (coding sequences) N     P. knowlesi predicted proteins P
    P. knowlesi chromosome contigs N
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T. annulata 
    T. annulata predicted genes (coding sequences) N     T. annulata predicted proteins P
    T. annulata chromosome contigs N
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T. brucei (More information on databases) 
    T. brucei predicted genes (coding sequences) N     T. brucei predicted proteins P
    T. brucei contigs N     T. brucei chromosome 9 reads N
    T. brucei chromosome 10 reads N     T. brucei chromosome 11 reads N
    African trypanosome EMBL data N     African trypanosome UniProt data P
    T. brucei GSS/EST clusters N     T. brucei telomere test reads N
    T. brucei intermediate chromosme reads N     T. brucei minichromosome population reads N
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T. brucei strain 427 
    T. brucei strain 427 predicted genes (coding sequences) N     T. brucei strain 427 predicted proteins P
    T. brucei strain 427 contigs N
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T. congolense 
    T. congolense predicted genes (coding sequences) N     T. congolense predicted proteins P
    T. congolense reads N     T. congolense GeneDB contigs N
    T. congolense contigs latest assembly (May07) N     T. congolense scaffolds latest assembly (May07) N
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T. cruzi 
    T. cruzi predicted genes (coding sequences) N     T. cruzi predicted proteins P
    T. cruzi contigs N     T. cruzi UniProt data P
    T. cruzi EMBL data N
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T. brucei gambiense 
    T. b. gambiense predicted genes (coding sequences) N     T. b. gambiense predicted proteins P
    T. b. gambiense reads N     T. b. gambiense contigs N
    T. b. gambiense contigs (latest assembly) N
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T. vivax 
    T. vivax predicted genes (coding sequences) N     T. vivax predicted proteins P
    T. vivax reads N     T. vivax contigs N
    T. vivax contigs from latest assembly (28.11.07) N
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B. bronchiseptica 
    B. bronchiseptica complete sequence N     B. bronchiseptica predicted proteins P
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B. fragilis 
    B. fragilis predicted genes (coding sequences) N     B. fragilis predicted proteins P
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B. parapertussis 
    B. parapertussis complete sequence N     B. parapertussis predicted proteins P
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B. pertussis 
    B. pertussis complete sequence N     B. pertussis predicted proteins P
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B. pseudomallei 
    B. pseudomallei predicted genes (coding sequences) N     B. pseudomallei predicted proteins P
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C. abortus 
    C. abortus predicted genes (coding sequences) N     C. abortus predicted proteins P
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C. jejuni 
    C. jejuni predicted genes (coding sequences) N     C. jejuni predicted proteins P
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C. diphtheriae 
    C. diphtheria predicted genes (coding sequences) N     C. diphtheria predicted proteins P
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E. carotovora 
    E. carotovora predicted genes (coding sequences) N     E. carotovora predicted proteins P
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R. leguminosarum 
    R. leguminosarum MRSA predicted genes (coding sequences) N     R. leguminosarum MRSA proteins P
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S. aureus MRSA252 
    S. aureus MRSA predicted genes (coding sequences) N     S. aureus MRSA proteins P
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S. aureus MSSA476 
    S. aureus MSSA predicted genes (coding sequences) N     S. aureus MSSA proteins P
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S. coelicolor 
    S. coelicolor predicted genes (coding sequences) N     S. coelicolor proteins P
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S. pyogenes 
    S. pyogenes predicted genes (coding sequences) N     S. pyogenes proteins P
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S. typhi 
    S. typhi chromosomal sequence N     S. typhi chromosomal proteins P
    S. typhi pHCM1 sequence N     S. typhi pHCM1 proteins P
    S. typhi pHCM2 sequence N     S. typhi pHCM2 proteins P
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G. morsitans 
    G. morsitans salivary gland clustered ESTs N     G. morsitans salivary gland clustered ESTs translated sequences P
    G. morsitans midgut clustered ESTs N     G. morsitans midgut clustered ESTs translated sequences P
    G. morsitans head clustered ESTs N     G. morsitans reproductive organ clustered ESTs N
    G. morsitans fat body clustered ESTs N     G. morsitans salivary gland EST reads N
    G. morsitans midgut EST reads N     G. morsitans head EST reads N
    G. morsitans reproductive organ EST reads N     G. morsitans BAC sequences N
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L. longipalpis 
    L. longipalpis clustered ESTs N     L. longipalpis clustered ESTs translated proteins P
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E. huxleyi virus 86 
    E. huxleyi predicted genes (coding sequences) N     E. huxleyi predicted proteins P
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S. mansoni 
    S. mansoni predicted genes (coding sequences) N     S. mansoni predicted proteins P
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RESULTS
    

Note: OmniBLAST searches may take several minutes depending on the number of selected databases
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Retrieve Previous Results

The results from previous BLAST jobs are stored for 3 days. You can retrieve them via their job id:
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Hosted by the Sanger Institute

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